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Investigation of an Influenza A (H3N2) outbreak in evacuation centres following the Great East Japan earthquake, 2011
© Kamigaki et al.; licensee BioMed Central Ltd. 2014
Received: 17 June 2013
Accepted: 10 January 2014
Published: 14 January 2014
The Great East Japan Earthquake of magnitude 9.0 that struck on 11 March 2011 resulted in more than 18000 deaths or cases of missing persons. The large-scale tsunami that followed the earthquake devastated many coastal areas of the Tohoku region, including Miyagi Prefecture, and many residents of the tsunami-affected areas were compelled to reside in evacuation centres (ECs). In Japan, seasonal influenza epidemics usually occur between December and March. At the time of the Great East Japan Earthquake on 11 March 2011, influenza A (H3N2) was still circulating and there was a heightened concern regarding severe outbreaks due to influenza A (H3N2).
After local hospital staff and public health nurses detected influenza cases among the evacuees, an outbreak investigation was conducted in five ECs that had reported at least one influenza case from 23 March to 11 April 2011. Cases were confirmed by point-of-care tests and those residues were obtained and subjected to reverse transcription PCR and/or real time RT-PCR for sub-typing of influenza.
There were 105 confirmed cases detected during the study period with a mean attack rate of 5.3% (range, 0.8%–11.1%). An epidemiological tree for two ECs demonstrated same-room and familial links that accounted for 88.5% of cases. The majority of cases occurred in those aged 15-64 years, who were likely to have engaged in search and rescue activities. No deaths were reported in this outbreak. Familial link accounted for on average 40.5% of influenza cases in two ECs and rooms where two or more cases were reported accounted for on average 85% in those ECs. A combination of preventative measures, including case cohorting, personal hygiene, wearing masks, and early detection and treatment, were implemented during the outbreak period.
Influenza can cause outbreaks in a disaster setting when the disaster occurs during an epidemic influenza season. The transmission route is more likely to be associated with sharing room and space and with familial links. The importance of influenza surveillance and early treatments should be emphasized in EC settings for implementing preventive control measures.
The Great East Japan Earthquake of magnitude 9.0 that struck on 11 March 2011 resulted in more than 18000 deaths or cases of missing persons . The large-scale tsunami that followed the earthquake devastated many coastal areas of the Tohoku region, including Miyagi Prefecture, and many residents of the tsunami-affected areas were compelled to reside in evacuation centres (ECs). Reportedly, more than 1300 ECs were established to accommodate more than 315000 evacuees in Miyagi Prefecture . These ECs included officially designated centres and other buildings such as community centres, city halls, nursing homes, and schools to manage the huge surge of evacuees.
Japan has one of the most rapidly aging populations and the 2010 National Census found that 23% of the Japanese population was 65 years or older . The coastal area of the Tohoku region, which was most severely affected by the tsunami, has a higher percentage of elderly residents than the national average and, consequently, an increase in the incidence of some diseases that affect the elderly, such as pneumonia , occurred after the earthquake.
After a natural disaster, the risk of infectious disease outbreaks often becomes a major concern. Infectious diseases that may cause outbreaks in post-disaster settings can be categorized into four groups: waterborne diseases, acute respiratory infections, vector-borne diseases, and infections as a result of wounds or injuries . Of these diseases, acute respiratory infections, including influenza, are among the most common that occur after natural disasters [6, 7]. However, there is limited information regarding influenza outbreaks after natural disasters  partly because of the limited ability to confirm suspected cases . The influenza virus is one of the most common causes of acute respiratory diseases that are usually self-limited but can sometimes lead to severe complications such as pneumonia and influenza associated encephalopathy . In Japan, influenza has been monitored under national surveillance with approximately 5,000 sentinel sites  and the estimated number of influenza outpatients was higher among children less than 10 years while approximately 45% of reported influenza inpatients were the elderly aged over 70 years in 2011/2012 season . Residents aged ≥65 years are prioritized for influenza vaccination; 51% of the elderly of that age was vaccinated in 2006, which has been increased from 17% in 2000 . In Japan, seasonal influenza epidemics usually occur between December and March. At the time of the Great East Japan Earthquake on 11 March 2011, influenza A (H3N2) was still circulating, and there was an increasing trend of influenza B toward April 2011, both nationwide  and in the affected areas [14, 15]. Studies regarding influenza-associated mortality revealed that a higher impact was associated with influenza A (H3N2) compared with other seasonal influenza viruses [16, 17] and influenza A(H1N1)pdm09 during the pandemic period , particularly among the elderly. Because the majority of evacuees in the ECs were elderly, there was a heightened concern regarding severe outbreaks due to influenza A (H3N2). To respond to a potential influenza outbreak in the ECs, we conducted an outbreak investigation in ECs located in Yamamoto, Miyagi Prefecture, Japan. In this study, we describe the epidemiological characteristics of influenza in an EC setting.
Yamamoto is located on the southern coast of Miyagi Prefecture, and according to the 2010 National Census, it has a population of 16704, of which 31.6% are ≥65 years and 10.1% are ≤15 years . Because of the devastating damage caused by the tsunami, a total of 634 people died or were missing and more than 5800 evacuees sought refuge in 19 ECs, 4 days after the earthquake.
After local hospital staff and public health nurses detected influenza cases among the evacuees, an outbreak investigation was conducted in five ECs that had reported at least one influenza case from 23 March to 11 April 2011. Two ECs were schools [EC (C) and (E)] and three were community centres [EC (A), (B) and (D)]. A febrile patient was initially identified by either self-reporting or health check done by public health nurses. The patient was seamlessly examined with the point-of-care (POC) test for influenza confirmation at either temporary clinic set up at evacuation centres or consultation rounds done by medical aid team. Due to the limited capacity to store and transport samples during that period, partial of residues obtained from the POC tests were subjected to reverse transcription PCR (RT-PCR) for influenza sub-typing. Epidemiological data, including demographic characteristics, residence, date of onset, clinical symptoms, familial links to previous cases, and history of wearing masks, were obtained by interviewing patients. A familial link was defined as a link between family members living in the same home before the earthquake. Data regarding the age distribution of evacuees could be obtained from only two ECs.
An attack rate (AR) was defined as the proportion of confirmed influenza cases in the average number of evacuees in each EC on 25 March, 3 April and 10 April 2011. One EC could not count the number of evacuees on either 3 April or 10 April 2011 because it was merged with another EC. All data were compiled with Microsoft Excel (Microsoft Corp., Redmond, WA, USA) and analyzed with R 2.14.2 .
An investigator explained the objectives of this investigation and obtained the verbal consent to participate this investigation from cases or parents or guardians if a case was children. The questionnaire was never completed if cases declined to participate. This study was reviewed and approved by the ethical committee of Tohoku University Graduate School of Medicine (2013-1-252).
Basic profiles of five evacuation centres and influenza cases, Yamamoto town
No. of evacuees*
% of ≤ 15 years in evacuees
% of ≥ 65 years in evacuees
No. of influenza case
Index case (age, sex)
Mean age of influenza cases
Evacuation centre A
Evacuation centre B
Evacuation centre C
Evacuation centre D
Evacuation centre E
An outbreak of influenza A (H3N2) occurred in the ECs after the Great East Japan Earthquake of 2011. Natural disasters, including earthquakes, may lead to a surge of evacuees, population displacement, and a breakdown of the healthcare system in affected areas. Consequently, the risk of an infectious disease outbreak after a natural disaster is increased because of various factors such as poor hygiene and overcrowding of emergency shelters . A variety of infectious diseases can potentially cause outbreaks following natural disasters ; however, the source of infection is more likely to be a microbial agent circulating in the community rather than one introduced from the outside . The Great East Japan Earthquake occurred on 11 March 2011 when influenza was still circulating in Japan; therefore, the possibility of an influenza outbreak at that time was increased as reported in a previous study . The influenza outbreak began more than 1 week after the earthquake and simultaneously spread to 5 ECs and accounted for 105 evacuees in Yamamoto. ECs where higher AR was recorded had the adult male case as an index case and 51.7% and 71.0% of cases were aged between 15 and 64 years in EC (B) and (C) respectively. Although an exact transmission route was not identified, our findings suggested that the influenza virus was introduced into the ECs through search and rescue activities, particularly in the early phase of this outbreak, in which a large number of working age adults were engaged together with others arriving from affected areas. Previous molecular study observed different clades of influenza A (H3N2) before and after the earthquake . Similar to the cholera outbreak after the Haitian earthquake in 2010, molecular evidence indicated that Vibrio cholerae was introduced from outside of the affected area [21–23]. Taken together, these findings indicated a potential risk of the introduction of infectious diseases into affected areas by relief workers. Thus, it is important to ensure the health status and vaccination history among relief workers before they are permitted to enter affected areas.
The AR in children <15 years old was estimated to be less than the average AR in both EC (B) and (C), but this inding did not directly reflect a low proportion of children in the ECs because the proportions were compatible with those reported in the 2010 National Census. In fact, children are more frequently in contact with their parents and relatives than schoolmates or playmates as indicated by a study regarding social mixing during school holidays . In our study, the majority of childhood cases had either a room link or a familial link [80% in EC (B) and 67% in EC (C)]. Other than these two ECs, there was one influenza case each in EC (A) and EC (E), in which the patient was <15 years. The latter case was the index case, but the route of infection remained unclear.
There were no deaths reported in this outbreak; however, the population of ≥65 years accounted for 21.9% cases. Taken together with the fact that influenza A (H3N2) cases are more severe, particularly in the elderly , this outbreak had the potential to cause significant morbidity and mortality, which motivated healthcare officials in Japan to prioritize measures to prevent the spread of influenza in ECs and to promote early treatment, particularly in the elderly. Finally, the mean AR was 5.3% (range, 0.8%–11.1%), which was relatively low, indicating successful interruption of influenza transmission by implementing several preventive measures such as active case identification, case cohorting in designated rooms, and wearing masks as previously described .
This study had some limitations. First, we could only obtain 27 POC residues from the 105 cases and 22 were positive for influenza A (H3N2). However, a surveillance study revealed a predominant circulation of influenza A(H3N2) in ECs in Miyagi Prefecture . We believe that the observed outbreaks were caused by influenza A(H3N2). Second, we could only obtain background information of the evacuees in two ECs; therefore, we may have missed some characteristics of influenza transmission, particularly in the ECs with only two cases. Third, information regarding control measures such as wearing masks and vaccination history was insufficient; therefore, it was somewhat difficult to evaluate the effectiveness of control measures in the ECs. In spite of these limitations, a combination of preventive measures consisting of case cohorting, personal hygiene, wearing masks and early detection and treatment led to a low influenza AR.
In conclusion, influenza can cause outbreaks in a disaster setting when the disaster occurs during an epidemic influenza season. The transmission route is more likely to be associated with same-room and familial links. The importance of monitoring influenza in ECs for implementing preventive control measures should be emphasized.
We would like to express our appreciation to all emergency medical teams, particularly the Japan Self Defence Force medical teams as well as the National Hospital Organization members who worked in Yamamoto for helping the collection of residues. We would also like to thank staffs in Miyagi Prefecture and the Infectious Disease Surveillance Centre, National Institute of Infectious Diseases, for their technical support during this investigation.
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