Table 3 Genotype distribution at the seven surveillance sites in India during the 4 years study period
From: Rotavirus gastroenteritis in Indian children < 5 years hospitalized for diarrhoea, 2012 to 2016
Vellore | Kolenchery | Trichy | Ludhiana | Hyderabad | New Delhi | Tirupati | Total | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N | % | N | % | N | % | N | % | N | % | N | % | N | % | N | % | |
G1P[4] | 2 | 0.5 | 4 | 1.0 | 3 | 1.1 | – | – | 2 | 1.3 | 4 | 0.9 | 3 | 1.7 | 18 | 0.9 |
G1P[6] | 7 | 1.8 | 3 | 0.8 | 8 | 2.9 | 3 | 1.5 | 1 | 0.7 | 21 | 4.8 | 2 | 1.1 | 45 | 2.2 |
G1P[8] | 238 | 62.6 | 189 | 49.3 | 179 | 65.6 | 54 | 26.6 | 64 | 41.8 | 177 | 40.4 | 101 | 56.1 | 1002 | 49.9 |
G2P[4] | 32 | 8.4 | 21 | 5.5 | 23 | 8.4 | 37 | 18.2 | 36 | 23.5 | 35 | 8.0 | 12 | 6.7 | 196 | 9.8 |
G2P[6] | – | – | 5 | 1.3 | – | – | 5 | 2.5 | – | – | 12 | 2.7 | 1 | 0.6 | 23 | 1.1 |
G2P[8] | 1 | 0.3 | – | – | – | – | – | – | – | – | – | – | – | – | 1 | 0.05 |
G3P[4] | – | – | 1 | 0.3 | – | – | – | – | – | – | 2 | 0.5 | 1 | 0.6 | 4 | 0.2 |
G3P[6] | – | – | 1 | 0.3 | – | – | – | – | – | – | – | – | – | – | 1 | 0.05 |
G3P[8] | 4 | 1.1 | 2 | 0.5 | 9 | 3.3 | 11 | 5.4 | 3 | 2.0 | 27 | 6.2 | 2 | 1.1 | 58 | 2.9 |
G4P[6] | – | – | 1 | 0.3 | – | – | – | – | – | – | – | – | – | – | 1 | 0.05 |
G9P[4] | 31 | 8.2 | 25 | 6.5 | 16 | 5.9 | 32 | 15.8 | 9 | 5.9 | 41 | 9.4 | 23 | 12.8 | 177 | 8.8 |
G9P[6] | 1 | 0.3 | 3 | 0.8 | – | – | 11 | 5.4 | – | – | 4 | 0.9 | – | – | 19 | 0.9 |
G9P[8] | 6 | 1.6 | 39 | 10.2 | 9 | 3.3 | 9 | 4.4 | 2 | 1.3 | 5 | 1.1 | 1 | 0.6 | 71 | 3.5 |
G10P[11] | 9 | 2.4 | 1 | 0.3 | – | – | – | – | – | – | – | – | – | – | 10 | 0.5 |
G12P[4] | – | – | 2 | 0.5 | – | – | 2 | 1.0 | – | – | 2 | 0.5 | 1 | 0.6 | 7 | 0.3 |
G12P[6] | 10 | 2.6 | 31 | 8.1 | 2 | 0.7 | 11 | 5.4 | – | – | 43 | 9.8 | 8 | 4.4 | 105 | 5.2 |
G12P[8] | 10 | 2.6 | 8 | 2.1 | 3 | 1.1 | 3 | 1.5 | 6 | 3.9 | 10 | 2.3 | 9 | 5.0 | 49 | 2.4 |
G12P[11] | – | – | – | – | – | – | – | – | – | – | 1 | 0.2 | – | – | 1 | 0.05 |
Mixed | 18 | 4.7 | 38 | 9.9 | 15 | 5.5 | 23 | 11.3 | 11 | 7.2 | 45 | 10.3 | 9 | 5.0 | 159 | 7.9 |
Partially typed | 4 | 1.1 | 2 | 0.5 | 3 | 1.1 | – | – | 7 | 4.6 | 3 | 0.7 | 2 | 1.1 | 21 | 1.0 |
Untyped | 7 | 1.8 | 7 | 1.8 | 3 | 1.1 | 2 | 1.0 | 12 | 7.8 | 6 | 1.4 | 5 | 2.8 | 42 | 2.1 |
Total | 380 | 383 | 273 | 203 | 153 | 438 | 180 | 2010 | 100.0 | |||||||